Genome Annotation:
The putative function of the predicted genes was annotated using BLASTP searches against the UniProt Viridiplantae and TAIR databases. InterProScan was used to detect conserved motifs and domains in the predicted protein sequences. Gene ontology (GO) terms were assigned based on their best protein hit in the Uniprot database. The transcription factors (TFs) were identified using HMMER profile scan of the conserved domain(s) in different TF families.
Download:
Functional annotation: Excel (.xlsx)
GO annotation: Excel (.xlsx)
Conserved Pfam Domain: Excel (.xlsx)
TF Family annotation: Excel (.xlsx)
